STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429865_02464Unannotated protein. (306 aa)    
Predicted Functional Partners:
GCA_000429865_02465
Unannotated protein.
 
  0.996
GCA_000429865_02466
Unannotated protein.
 
  0.992
GCA_000429865_02463
Unannotated protein.
 
  0.989
GCA_000429865_01959
Unannotated protein.
 
 
  0.982
GCA_000429865_03359
Unannotated protein.
 
 
  0.981
GCA_000429865_00602
Unannotated protein.
 
 
  0.975
GCA_000429865_00950
Unannotated protein.
 
 
  0.969
GCA_000429865_00951
Unannotated protein.
 
 
  0.969
GCA_000429865_02462
Unannotated protein.
 
  0.968
GCA_000429865_01873
Unannotated protein.
 
 
  0.967
Your Current Organism:
Cucumibacter marinus
NCBI taxonomy Id: 422296
Other names: C. marinus DSM 18995, Cucumibacter marinus CL-GR60, Cucumibacter marinus DSM 18995, Rhizobiales bacterium CL-GR60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.