Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gno_2Gluconate 5-dehydrogenase; Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)    
Predicted Functional Partners:
idnD
Zinc-binding alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.971
tycC_2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.894
gntK
Gluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.893
kdgK_5
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.886
IQ63_37595
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.872
gndA_1
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
  0.858
IQ63_08835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.856
IQ63_12635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.856
IQ63_40630
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.856
IQ63_40640
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.856
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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