STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtnN_3Nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)    
Predicted Functional Partners:
mtnP
Purine nucleoside phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
    
 0.927
speE_2
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
     
 0.909
ahcY_2
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.895
IQ63_07975
Adenosylhomocysteinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.895
IQ63_05280
5-methylcytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.887
IQ63_05285
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.887
mtaD_2
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.877
IQ63_20615
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.810
triA
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.810
IQ63_02295
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.802
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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