oppD_7 protein (Streptomyces acidiscabies) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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filled nodes:
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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

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[Homology]

Score

oppD_7

Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (358 aa)

Predicted Functional Partners:

dppC

0.983

ddpC_3

0.983

gsiD_2

0.982

gsiC_5

0.979

dppB_3

0.970

oppC_2

0.969

gsiD_4

0.966

gsiD_3

0.964

ddpC_1

0.964

gsiC_6

0.962

Your Current Organism:

Streptomyces acidiscabies

NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ddpC_1	ddpC_3	IQ63_38925	IQ63_42210	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
ddpC_1	dppB_3	IQ63_38925	IQ63_23790	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.710
ddpC_1	dppC	IQ63_38925	IQ63_39490	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
ddpC_1	gsiC_5	IQ63_38925	IQ63_02770	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
ddpC_1	gsiC_6	IQ63_38925	IQ63_23850	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
ddpC_1	gsiD_2	IQ63_38925	IQ63_03035	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.574
ddpC_1	oppD_7	IQ63_38925	IQ63_02775	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.964
ddpC_3	ddpC_1	IQ63_42210	IQ63_38925	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
ddpC_3	dppB_3	IQ63_42210	IQ63_23790	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.687
ddpC_3	dppC	IQ63_42210	IQ63_39490	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
ddpC_3	gsiC_5	IQ63_42210	IQ63_02770	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
ddpC_3	gsiC_6	IQ63_42210	IQ63_23850	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685
ddpC_3	gsiD_2	IQ63_42210	IQ63_03035	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
ddpC_3	gsiD_3	IQ63_42210	IQ63_23785	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
ddpC_3	gsiD_4	IQ63_42210	IQ63_23820	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.604
ddpC_3	oppC_2	IQ63_42210	IQ63_23845	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603
ddpC_3	oppD_7	IQ63_42210	IQ63_02775	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.983
dppB_3	ddpC_1	IQ63_23790	IQ63_38925	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.710
dppB_3	ddpC_3	IQ63_23790	IQ63_42210	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.687
dppB_3	dppC	IQ63_23790	IQ63_39490	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684

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