Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sglT_2Na+/galactose cotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (559 aa)    
Predicted Functional Partners:
IQ63_04490
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.971
luxQ_2
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.856
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
     0.808
galT
Galactose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.804
galE_4
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.779
luxQ_1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.604
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.584
fadM
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.543
degU_16
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
accA1_3
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.412
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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