Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| IQ63_08755 | IQ63_08760 | IQ63_08755 | IQ63_08760 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| IQ63_08755 | proC | IQ63_08755 | IQ63_08785 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.576 |
| IQ63_08755 | ybhF_7 | IQ63_08755 | IQ63_08775 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| IQ63_08755 | ybhR | IQ63_08755 | IQ63_08780 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| IQ63_08760 | IQ63_08755 | IQ63_08760 | IQ63_08755 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| IQ63_08760 | proC | IQ63_08760 | IQ63_08785 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.576 |
| IQ63_08760 | ybhF_7 | IQ63_08760 | IQ63_08775 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| IQ63_08760 | ybhR | IQ63_08760 | IQ63_08780 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| IQ63_37310 | ybhF_7 | IQ63_37310 | IQ63_08775 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
| IQ63_38000 | ybhF_7 | IQ63_38000 | IQ63_08775 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.613 |
| atpA | atpD | IQ63_14745 | IQ63_14735 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | atpG | IQ63_14745 | IQ63_14740 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpA | ybhF_7 | IQ63_14745 | IQ63_08775 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.559 |
| atpD | atpA | IQ63_14735 | IQ63_14745 | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| atpD | atpG | IQ63_14735 | IQ63_14740 | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpD | ybhF_7 | IQ63_14735 | IQ63_08775 | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
| atpG | atpA | IQ63_14740 | IQ63_14745 | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| atpG | atpD | IQ63_14740 | IQ63_14735 | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpG | ybhF_7 | IQ63_14740 | IQ63_08775 | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.545 |
| drrB_4 | ybhF_7 | IQ63_32220 | IQ63_08775 | Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
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