IQ63_10405 protein (Streptomyces acidiscabies)

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[Homology]

Score

IQ63_10405

RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)

Predicted Functional Partners:

IQ63_10400

0.770

rpoC

0.596

rpoB

0.590

cheR2

0.579

rpoA

0.554

rpoZ

0.553

IQ63_34525

0.540

IQ63_31915

0.530

IQ63_05775

0.524

rsrA

0.524

Your Current Organism:

Streptomyces acidiscabies

NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
IQ63_05775	IQ63_10405	IQ63_05775	IQ63_10405	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
IQ63_10400	IQ63_10405	IQ63_10400	IQ63_10405	Alkylhydroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
IQ63_10405	IQ63_05775	IQ63_10405	IQ63_05775	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
IQ63_10405	IQ63_10400	IQ63_10405	IQ63_10400	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alkylhydroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
IQ63_10405	IQ63_31915	IQ63_10405	IQ63_31915	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.530
IQ63_10405	IQ63_34525	IQ63_10405	IQ63_34525	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
IQ63_10405	cheR2	IQ63_10405	IQ63_37505	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
IQ63_10405	rpoA	IQ63_10405	IQ63_27480	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.554
IQ63_10405	rpoB	IQ63_10405	IQ63_27190	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.590
IQ63_10405	rpoC	IQ63_10405	IQ63_27195	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.596
IQ63_10405	rpoZ	IQ63_10405	IQ63_36030	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.553
IQ63_10405	rsrA	IQ63_10405	IQ63_23235	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
IQ63_31915	IQ63_10405	IQ63_31915	IQ63_10405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.530
IQ63_34525	IQ63_10405	IQ63_34525	IQ63_10405	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
cheR2	IQ63_10405	IQ63_37505	IQ63_10405	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
cheR2	rpoB	IQ63_37505	IQ63_27190	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.454
rpoA	IQ63_10405	IQ63_27480	IQ63_10405	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
rpoA	rpoB	IQ63_27480	IQ63_27190	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	IQ63_27480	IQ63_27195	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	IQ63_27480	IQ63_36030	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999

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