Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xynB_1Xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (528 aa)    
Predicted Functional Partners:
abfB_1
alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.800
abfB_4
alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.799
engD_2
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.790
IQ63_04515
Lectin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.789
engD_1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.785
xynAS9_2
Endo-1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.783
pelA_2
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.773
IQ63_11280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.771
IQ63_38990
alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.771
xlnA_3
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.769
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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