STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCCopper homeostasis protein CutC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CutC family. (225 aa)    
Predicted Functional Partners:
IQ63_11615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.822
IQ63_11610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
IQ63_11605
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.749
IQ63_03660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.581
pgl_1-2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.579
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
   0.562
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
 
   
 0.535
copA_2
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.534
IQ63_34660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.519
IQ63_36040
Catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.516
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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