STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ63_15450Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)    
Predicted Functional Partners:
IQ63_43180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
IQ63_13640
Mini-circle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
IQ63_44655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
IQ63_30090
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.597
fabF_5
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.532
fabH_3
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
       0.532
IQ63_29480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
IQ63_08435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
IQ63_01735
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
IQ63_00180
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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