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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ63_16630Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)    
Predicted Functional Partners:
IQ63_16625
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.907
IQ63_02050
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.709
IQ63_12475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
IQ63_14385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.671
IQ63_15385
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.646
IQ63_15980
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.642
IQ63_11695
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.633
IQ63_08400
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.624
IQ63_27270
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
IQ63_06315
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.620
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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