STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ63_16825Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)    
Predicted Functional Partners:
luxQ_2
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.873
IQ63_24205
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.856
rsbV_2
anti-sigma-B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
   0.852
IQ63_02065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.833
luxQ_1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.793
IQ63_00165
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.771
IQ63_24680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.767
IQ63_21920
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.753
IQ63_37250
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
IQ63_31810
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.715
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.