STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ63_17300Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)    
Predicted Functional Partners:
IQ63_05270
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.890
IQ63_45115
Erythromycin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.771
IQ63_17295
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.764
IQ63_26845
Erythromycin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.741
IQ63_37920
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.708
IQ63_01060
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.704
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
     
 0.697
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
    0.676
IQ63_40145
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.660
epsD
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.644
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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