Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| IQ63_00155 | IQ63_17675 | IQ63_00155 | IQ63_17675 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.873 |
| IQ63_00155 | katE | IQ63_00155 | IQ63_30080 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroperoxidase; Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.645 |
| IQ63_17670 | IQ63_17675 | IQ63_17670 | IQ63_17675 | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.873 |
| IQ63_17670 | katE | IQ63_17670 | IQ63_30080 | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroperoxidase; Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.547 |
| IQ63_17670 | pdg | IQ63_17670 | IQ63_17665 | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endonuclease; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.790 |
| IQ63_17675 | IQ63_00155 | IQ63_17675 | IQ63_00155 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.873 |
| IQ63_17675 | IQ63_17670 | IQ63_17675 | IQ63_17670 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.873 |
| IQ63_17675 | arc | IQ63_17675 | IQ63_35080 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase AAA; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.914 |
| IQ63_17675 | glpK | IQ63_17675 | IQ63_35010 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.768 |
| IQ63_17675 | glpK-2 | IQ63_17675 | IQ63_36365 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.768 |
| IQ63_17675 | katE | IQ63_17675 | IQ63_30080 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroperoxidase; Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.685 |
| IQ63_17675 | lppS_2 | IQ63_17675 | IQ63_06370 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.682 |
| IQ63_17675 | lppS_4 | IQ63_17675 | IQ63_02560 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.678 |
| IQ63_17675 | mec | IQ63_17675 | IQ63_05490 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.735 |
| IQ63_17675 | pdg | IQ63_17675 | IQ63_17665 | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endonuclease; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.754 |
| arc | IQ63_17675 | IQ63_35080 | IQ63_17675 | ATPase AAA; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.914 |
| arc | glpK | IQ63_35080 | IQ63_35010 | ATPase AAA; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.996 |
| arc | glpK-2 | IQ63_35080 | IQ63_36365 | ATPase AAA; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.996 |
| arc | mec | IQ63_35080 | IQ63_05490 | ATPase AAA; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| glpK | IQ63_17675 | IQ63_35010 | IQ63_17675 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
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