Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| IQ63_22120 | IQ63_37760 | IQ63_22120 | IQ63_37760 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.585 |
| IQ63_22120 | kup | IQ63_22120 | IQ63_22125 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.772 |
| IQ63_22120 | luxQ_2 | IQ63_22120 | IQ63_00510 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
| IQ63_22120 | recN | IQ63_22120 | IQ63_01595 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | 0.503 |
| IQ63_22120 | rsmB | IQ63_22120 | IQ63_36070 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | rRNA cytosine-C5-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.684 |
| IQ63_22120 | rsmI | IQ63_22120 | IQ63_04330 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | uroporphyrin-III methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.600 |
| IQ63_22120 | trkA_1 | IQ63_22120 | IQ63_22135 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.677 |
| IQ63_22120 | trkA_2 | IQ63_22120 | IQ63_22130 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.677 |
| IQ63_22120 | trmB | IQ63_22120 | IQ63_26610 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.589 |
| IQ63_22120 | trmI | IQ63_22120 | IQ63_35060 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Transposase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. | 0.779 |
| IQ63_37760 | IQ63_22120 | IQ63_37760 | IQ63_22120 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.585 |
| IQ63_37760 | rsmB | IQ63_37760 | IQ63_36070 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | rRNA cytosine-C5-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.482 |
| IQ63_37760 | rsmI | IQ63_37760 | IQ63_04330 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | uroporphyrin-III methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.477 |
| IQ63_37760 | trmB | IQ63_37760 | IQ63_26610 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.432 |
| kup | IQ63_22120 | IQ63_22125 | IQ63_22120 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.772 |
| kup | trkA_1 | IQ63_22125 | IQ63_22135 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| kup | trkA_2 | IQ63_22125 | IQ63_22130 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.881 |
| luxQ_2 | IQ63_22120 | IQ63_00510 | IQ63_22120 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.537 |
| luxQ_2 | rsmB | IQ63_00510 | IQ63_36070 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | rRNA cytosine-C5-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.888 |
| luxQ_2 | trkA_1 | IQ63_00510 | IQ63_22135 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
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