Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IQ63_24360Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)    
Predicted Functional Partners:
minD
Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
IQ63_24330
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
IQ63_24335
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
IQ63_24340
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
IQ63_17735
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.950
IQ63_24345
Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.949
IQ63_17740
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.943
IQ63_17730
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.936
IQ63_43780
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.897
nreC_4
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.883
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.