STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ63_25855Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)    
Predicted Functional Partners:
ftsY
Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
    
 0.880
ffh
Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.696
IQ63_03150
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.659
IQ63_03170
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.659
IQ63_18745
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.659
IQ63_21415
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.659
IQ63_22815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.659
IQ63_22895
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.659
IQ63_28390
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.659
IQ63_28410
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.659
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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