Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IQ63_28550 | IQ63_28555 | IQ63_28550 | IQ63_28555 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
IQ63_28550 | IQ63_37520 | IQ63_28550 | IQ63_37520 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.492 |
IQ63_28550 | embR_5 | IQ63_28550 | IQ63_36620 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.868 |
IQ63_28550 | embR_6 | IQ63_28550 | IQ63_10950 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.611 |
IQ63_28550 | hspX | IQ63_28550 | IQ63_33140 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molecular chaperone Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family. | 0.523 |
IQ63_28550 | moaR1_1 | IQ63_28550 | IQ63_20500 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.458 |
IQ63_28555 | IQ63_28550 | IQ63_28555 | IQ63_28550 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
IQ63_37520 | IQ63_28550 | IQ63_37520 | IQ63_28550 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.492 |
embR_5 | IQ63_28550 | IQ63_36620 | IQ63_28550 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.868 |
embR_6 | IQ63_28550 | IQ63_10950 | IQ63_28550 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.611 |
hspX | IQ63_28550 | IQ63_33140 | IQ63_28550 | Molecular chaperone Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family. | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.523 |
moaR1_1 | IQ63_28550 | IQ63_20500 | IQ63_28550 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.458 |