STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SBP6Cystathionine beta-l. (446 aa)    
Predicted Functional Partners:
A0A317SGM5
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.972
A0A317SEE9
Pyridoxal phosphate-dependent enzyme, beta subunit.
  
 0.966
A0A317SW11
Cobalamin-independent methionine synthase.
  
 
 0.963
A0A317SIF8
PALP-domain-containing protein.
  
 0.958
A0A317SJ90
PLP-dependent transferase.
  
 
0.945
A0A317SHZ3
Rhodanese-like protein.
  
 
 0.927
A0A317SGB1
Cysteine dioxygenase.
     
 0.910
A0A317SK97
Homocysteine synthase.
  
 
0.908
A0A317SQN0
Adenosylhomocysteinase.
  
 0.907
A0A317SB33
Aspartate aminotransferase.
   
 
 0.904
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.