STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SCC6Xanthine dehydrogenase. (1358 aa)    
Predicted Functional Partners:
A0A317SFU3
Amidase signature enzyme.
     
 0.818
A0A317SCX5
Metallo-dependent hydrolase.
  
 
 0.765
A0A317SMG6
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.
    
 0.683
A0A317SVS5
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
   
 
 0.621
A0A317SV77
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.556
A0A317SJ05
Inosine/uridine-preferring nucleoside hydrolase.
    
  0.552
A0A317SJ38
Uncharacterized protein.
    
  0.552
A0A317SZE6
Ribokinase-like protein.
     
 0.542
A0A317SCH0
Pyridoxamine 5'-phosphate oxidase.
     
 0.539
A0A317SMT4
Adenine phosphoribosyl transferase.
     
 0.539
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.