Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A317SC49 | A0A317SET3 | Sterol-binding-like protein. | Pyruvate carboxyltransferase. | 0.839 |
A0A317SC49 | A0A317SFB1 | Sterol-binding-like protein. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.862 |
A0A317SC49 | A0A317SHH8 | Sterol-binding-like protein. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.821 |
A0A317SC49 | A0A317SHX7 | Sterol-binding-like protein. | Putative acetyl-CoA-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.902 |
A0A317SC49 | A0A317SLS8 | Sterol-binding-like protein. | Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.918 |
A0A317SC49 | A0A317SMC6 | Sterol-binding-like protein. | Uncharacterized protein. | 0.912 |
A0A317SC49 | A0A317SNR6 | Sterol-binding-like protein. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.902 |
A0A317SC49 | A0A317SPY8 | Sterol-binding-like protein. | NAD(P)-binding protein. | 0.676 |
A0A317SC49 | A0A317SR70 | Sterol-binding-like protein. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.911 |
A0A317SC49 | A0A317SU98 | Sterol-binding-like protein. | Acetoacetate-CoA ligase. | 0.859 |
A0A317SET3 | A0A317SC49 | Pyruvate carboxyltransferase. | Sterol-binding-like protein. | 0.839 |
A0A317SET3 | A0A317SFB1 | Pyruvate carboxyltransferase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.957 |
A0A317SET3 | A0A317SHH8 | Pyruvate carboxyltransferase. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.863 |
A0A317SET3 | A0A317SHX7 | Pyruvate carboxyltransferase. | Putative acetyl-CoA-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.919 |
A0A317SET3 | A0A317SLS8 | Pyruvate carboxyltransferase. | Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.879 |
A0A317SET3 | A0A317SMC6 | Pyruvate carboxyltransferase. | Uncharacterized protein. | 0.673 |
A0A317SET3 | A0A317SNR6 | Pyruvate carboxyltransferase. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.919 |
A0A317SET3 | A0A317SPY8 | Pyruvate carboxyltransferase. | NAD(P)-binding protein. | 0.835 |
A0A317SET3 | A0A317SR70 | Pyruvate carboxyltransferase. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.922 |
A0A317SET3 | A0A317SU98 | Pyruvate carboxyltransferase. | Acetoacetate-CoA ligase. | 0.905 |
page 1 of 6