STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SH32Rab family, other. (240 aa)    
Predicted Functional Partners:
A0A317SXI3
Phosphatidylinositol 3-kinase VPS34.
    
 0.951
A0A317T0S8
CNH domain-containing protein.
    
 
 0.901
A0A317SIY4
E3 ubiquitin-protein ligase PEP5.
    
 
 0.895
A0A317SVS2
CNH domain-containing protein.
    
 
 0.885
A0A317SNR9
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.883
A0A317SCE3
Ras-domain-containing protein.
  
 
 
0.881
A0A317SS32
Uncharacterized protein.
   
 0.874
A0A317T0Q0
Uncharacterized protein.
    
 0.872
A0A317SHS3
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.862
A0A317SJ70
VPS9 domain-containing protein.
    
 0.833
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.