STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SIB1Uncharacterized protein. (427 aa)    
Predicted Functional Partners:
A0A317SQR7
Uncharacterized protein.
    
 0.932
A0A317T0U6
EEF1-gamma domain-containing protein.
    
 0.778
A0A317SK77
Small nuclear ribonucleoprotein Sm D3.
    
 0.769
A0A317SII3
Small nuclear ribonucleoprotein Sm D2.
    
 0.762
A0A317SZX4
Small nuclear ribonucleoprotein G.
    
  0.743
A0A317SYS1
PHF5-like protein.
    
 0.739
A0A317SYI9
ARM repeat-containing protein.
    
 0.727
A0A317SBE6
Ankyrin.
    
 0.714
A0A317SGP8
ANK_REP_REGION domain-containing protein.
    
 0.714
A0A317SHT5
Ankyrin.
    
 0.714
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.