STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SIJ8Carbonic anhydrase. (285 aa)    
Predicted Functional Partners:
A0A317SDB3
Brix-domain-containing protein.
   
 
 0.689
A0A317SNG8
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.626
A0A317SH29
Brix-domain-containing protein.
   
    0.557
A0A317T0L9
Utp12 domain-containing protein.
   
    0.518
A0A317SSX8
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
   0.516
A0A317SHE5
Ribosomal protein L18/L5.
    
 
 0.514
A0A317SHJ6
Ribosomal_L18_c domain-containing protein.
    
 
 0.514
A0A317SJ25
Putative 60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.512
A0A317SH42
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
    0.505
A0A317SSR9
WD40 repeat-like protein.
   
    0.499
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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