Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A317SDB3 | A0A317SH29 | Brix-domain-containing protein. | Brix-domain-containing protein. | 0.967 |
A0A317SDB3 | A0A317SH42 | Brix-domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
A0A317SDB3 | A0A317SHE5 | Brix-domain-containing protein. | Ribosomal protein L18/L5. | 0.925 |
A0A317SDB3 | A0A317SHJ6 | Brix-domain-containing protein. | Ribosomal_L18_c domain-containing protein. | 0.925 |
A0A317SDB3 | A0A317SIJ8 | Brix-domain-containing protein. | Carbonic anhydrase. | 0.689 |
A0A317SDB3 | A0A317SJ25 | Brix-domain-containing protein. | Putative 60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. | 0.955 |
A0A317SDB3 | A0A317SNG8 | Brix-domain-containing protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.999 |
A0A317SDB3 | A0A317SSR9 | Brix-domain-containing protein. | WD40 repeat-like protein. | 0.906 |
A0A317SDB3 | A0A317SSX8 | Brix-domain-containing protein. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.995 |
A0A317SDB3 | A0A317T0L9 | Brix-domain-containing protein. | Utp12 domain-containing protein. | 0.934 |
A0A317SH29 | A0A317SDB3 | Brix-domain-containing protein. | Brix-domain-containing protein. | 0.967 |
A0A317SH29 | A0A317SH42 | Brix-domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.962 |
A0A317SH29 | A0A317SIJ8 | Brix-domain-containing protein. | Carbonic anhydrase. | 0.557 |
A0A317SH29 | A0A317SNG8 | Brix-domain-containing protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.935 |
A0A317SH29 | A0A317SSR9 | Brix-domain-containing protein. | WD40 repeat-like protein. | 0.859 |
A0A317SH29 | A0A317SSX8 | Brix-domain-containing protein. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.965 |
A0A317SH29 | A0A317T0L9 | Brix-domain-containing protein. | Utp12 domain-containing protein. | 0.836 |
A0A317SH42 | A0A317SDB3 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix-domain-containing protein. | 0.996 |
A0A317SH42 | A0A317SH29 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix-domain-containing protein. | 0.962 |
A0A317SH42 | A0A317SHE5 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosomal protein L18/L5. | 0.850 |
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