Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A317SBL8 | A0A317SJ33 | A0A317SBL8 | A0A317SJ33 | ERCC4 domain-containing protein. | Hva1_TUDOR domain-containing protein. | 0.674 |
A0A317SBL8 | A0A317SMX3 | A0A317SBL8 | A0A317SMX3 | ERCC4 domain-containing protein. | DNA polymerase. | 0.795 |
A0A317SBL8 | A0A317SX92 | A0A317SBL8 | A0A317SX92 | ERCC4 domain-containing protein. | DNA repair protein. | 0.949 |
A0A317SBL8 | FEN1 | A0A317SBL8 | A0A317T1M2 | ERCC4 domain-containing protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.887 |
A0A317SEM3 | A0A317SII3 | A0A317SEM3 | A0A317SII3 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
A0A317SEM3 | A0A317SJ33 | A0A317SEM3 | A0A317SJ33 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Hva1_TUDOR domain-containing protein. | 0.641 |
A0A317SEM3 | A0A317SNS5 | A0A317SEM3 | A0A317SNS5 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | SMN domain-containing protein. | 0.979 |
A0A317SEM3 | A0A317SZX4 | A0A317SEM3 | A0A317SZX4 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein G. | 0.999 |
A0A317SG29 | A0A317SJ33 | A0A317SG29 | A0A317SJ33 | Uncharacterized protein. | Hva1_TUDOR domain-containing protein. | 0.697 |
A0A317SG29 | A0A317SMX3 | A0A317SG29 | A0A317SMX3 | Uncharacterized protein. | DNA polymerase. | 0.999 |
A0A317SG29 | FEN1 | A0A317SG29 | A0A317T1M2 | Uncharacterized protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.959 |
A0A317SII3 | A0A317SEM3 | A0A317SII3 | A0A317SEM3 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
A0A317SII3 | A0A317SJ33 | A0A317SII3 | A0A317SJ33 | Small nuclear ribonucleoprotein Sm D2. | Hva1_TUDOR domain-containing protein. | 0.668 |
A0A317SII3 | A0A317SNS5 | A0A317SII3 | A0A317SNS5 | Small nuclear ribonucleoprotein Sm D2. | SMN domain-containing protein. | 0.975 |
A0A317SII3 | A0A317SZX4 | A0A317SII3 | A0A317SZX4 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein G. | 0.999 |
A0A317SII3 | A0A317T0S3 | A0A317SII3 | A0A317T0S3 | Small nuclear ribonucleoprotein Sm D2. | Pkr1-domain-containing protein. | 0.987 |
A0A317SJ33 | A0A317SBL8 | A0A317SJ33 | A0A317SBL8 | Hva1_TUDOR domain-containing protein. | ERCC4 domain-containing protein. | 0.674 |
A0A317SJ33 | A0A317SEM3 | A0A317SJ33 | A0A317SEM3 | Hva1_TUDOR domain-containing protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.641 |
A0A317SJ33 | A0A317SG29 | A0A317SJ33 | A0A317SG29 | Hva1_TUDOR domain-containing protein. | Uncharacterized protein. | 0.697 |
A0A317SJ33 | A0A317SII3 | A0A317SJ33 | A0A317SII3 | Hva1_TUDOR domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.668 |
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