A0A317SJ69 protein (Tuber magnatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A317SJ69

Uncharacterized protein. (126 aa)

Predicted Functional Partners:

A0A317SK45

0.821

A0A317SFB2

0.778

A0A317T2M8

0.778

A0A317SCV6

0.758

A0A317SGA3

0.758

A0A317SHC1

0.758

A0A317SLJ9

0.758

A0A317T1G8

0.744

A0A317SH73

0.720

A0A317SHG2

0.720

Your Current Organism:

Tuber magnatum

NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A317SCV6	A0A317SFB2	Uncharacterized protein.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.828
A0A317SCV6	A0A317SH73	Uncharacterized protein.	Actin-like ATPase domain-containing protein.	0.776
A0A317SCV6	A0A317SHG2	Uncharacterized protein.	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	0.846
A0A317SCV6	A0A317SJ69	Uncharacterized protein.	Uncharacterized protein.	0.758
A0A317SCV6	A0A317SK45	Uncharacterized protein.	Heat shock protein 70.	0.853
A0A317SCV6	A0A317T1G8	Uncharacterized protein.	Response regulator.	0.896
A0A317SCV6	A0A317T2M8	Uncharacterized protein.	Hsp7-like protein; Belongs to the heat shock protein 70 family.	0.820
A0A317SFB2	A0A317SCV6	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.828
A0A317SFB2	A0A317SGA3	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.828
A0A317SFB2	A0A317SH73	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Actin-like ATPase domain-containing protein.	0.730
A0A317SFB2	A0A317SHC1	Heat shock protein 70; Belongs to the heat shock protein 70 family.	ATP-dependent molecular chaperone HSC82.	0.874
A0A317SFB2	A0A317SHG2	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	0.869
A0A317SFB2	A0A317SJ69	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.778
A0A317SFB2	A0A317SK45	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70.	0.912
A0A317SFB2	A0A317SLJ9	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Flavin_Reduct domain-containing protein.	0.828
A0A317SFB2	A0A317T1G8	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Response regulator.	0.842
A0A317SFB2	A0A317T2M8	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Hsp7-like protein; Belongs to the heat shock protein 70 family.	0.818
A0A317SGA3	A0A317SFB2	Uncharacterized protein.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.828
A0A317SGA3	A0A317SH73	Uncharacterized protein.	Actin-like ATPase domain-containing protein.	0.776
A0A317SGA3	A0A317SHG2	Uncharacterized protein.	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	0.851