STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SKP8Actin/actin-like protein. (444 aa)    
Predicted Functional Partners:
A0A317SGN9
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.997
A0A317T128
Actin, gamma.
  
 
0.996
A0A317SWG3
SANT domain-containing protein.
   
 0.994
A0A317SMT0
SWIB domain-containing protein.
   
 0.993
A0A317SQ30
Uncharacterized protein.
    
 0.993
A0A317SFA0
SWIRM-domain-containing protein.
    
 0.991
A0A317T0W5
Enhancer of polycomb-like protein.
    
 0.989
A0A317SE05
Uncharacterized protein.
    
 0.988
A0A317SVQ3
SNF5-domain-containing protein.
   
 0.987
A0A317SAX5
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.986
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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