STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SNP5Lactamase_B domain-containing protein. (759 aa)    
Predicted Functional Partners:
A0A317SP19
Uncharacterized protein.
    
 0.999
A0A317SIU2
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.961
A0A317SE48
Ku DNA-binding complex, Ku70 subunit.
   
 0.948
A0A317SSJ1
CPSF_A domain-containing protein.
   
 0.895
A0A317T2G7
DNA ligase.
   
 0.884
A0A317SXS3
DUF3453 domain-containing protein.
   
 0.882
A0A317T3I3
Fip1-domain-containing protein.
    
 0.851
A0A317T124
Uncharacterized protein.
    
 0.835
A0A317SX98
Ssu72-like protein.
   
 0.825
A0A317SNS3
Uncharacterized protein.
    
 0.813
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.