STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SQF2Uncharacterized protein. (1218 aa)    
Predicted Functional Partners:
A0A317STQ8
Peptidase S59 domain-containing protein.
    
 0.994
A0A317SZ20
Uncharacterized protein.
  
 0.993
A0A317SGP1
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.991
A0A317SRN4
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.989
A0A317SHQ2
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.982
A0A317SMS2
Nup188_C domain-containing protein.
   
 0.906
A0A317SMJ1
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
   0.896
A0A317SK68
Nup54 domain-containing protein.
    
 0.869
A0A317T385
Uncharacterized protein.
    
 
 0.847
A0A317SIB4
Nuclear pore protein.
    
 0.825
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.