STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SQL5CYCLIN domain-containing protein. (300 aa)    
Predicted Functional Partners:
A0A317SD23
Pkinase-domain-containing protein.
    
 
 0.822
A0A317SGE1
Kinase-like protein.
    
 
 0.822
A0A317SQB2
HCNGP-domain-containing protein.
    
   0.686
A0A317SPQ5
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.652
A0A317SL34
Uncharacterized protein.
      
 0.595
A0A317SV57
Kinase-like protein.
      
 0.594
A0A317T1N4
Uncharacterized protein.
   
 
 0.525
A0A317SJE8
Uncharacterized protein.
     
  0.512
A0A317SFK9
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.505
A0A317SD79
Uncharacterized protein.
   
  
 0.481
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.