close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SQL6Fungal_trans domain-containing protein. (378 aa)    
Predicted Functional Partners:
A0A317SQR7
Uncharacterized protein.
    
 0.812
A0A317SYK6
Nitrate reductase.
    
 0.758
A0A317T1A1
TPR-like protein.
    
 0.642
A0A317T5W1
Uncharacterized protein.
    
  0.631
A0A317SPR6
Translational machinery component.
    
  0.630
A0A317SU44
Uncharacterized protein.
    
 0.630
A0A317SB35
Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
  0.623
A0A317SHR4
Nucleoside diphosphate kinase.
    
 0.623
A0A317SYC2
Uncharacterized protein.
    
  0.623
A0A317T0V6
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.623
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.