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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SQL8Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family. (221 aa)    
Predicted Functional Partners:
A0A317T0U6
EEF1-gamma domain-containing protein.
  
 0.999
A0A317SJI2
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.994
A0A317T0B8
Translationally controlled tumor-associated; Belongs to the TCTP family.
  
 
 0.985
A0A317SHI9
WD40 repeat-like protein.
   
 
 0.978
A0A317SFH6
Uncharacterized protein.
  
 
 0.976
A0A317SZA7
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.973
A0A317SZC0
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.973
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.973
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.969
A0A317T481
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.966
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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