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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SQL9Uncharacterized protein. (375 aa)    
Predicted Functional Partners:
A0A317SQU9
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
     
 0.967
A0A317SRE9
Uncharacterized protein.
   
 0.965
A0A317SGH6
PHP domain-like protein.
    
 0.963
A0A317SYU8
RNAse P, Rpr2/Rpp21 subunit.
   
 0.953
A0A317T482
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.944
A0A317SGW1
POPLD-domain-containing protein.
    
 0.937
A0A317SG90
60S ribosomal protein L8.
    
 0.713
A0A317SL23
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 0.713
A0A317SL28
Uncharacterized protein.
    
 0.713
A0A317SXI7
L30e-like protein.
    
 0.713
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.