STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SQL9Uncharacterized protein. (375 aa)    
Predicted Functional Partners:
A0A317SRE9
Uncharacterized protein.
   
 0.989
A0A317SGH6
PHP domain-like protein.
    
 0.980
A0A317T482
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.957
A0A317SGW1
POPLD-domain-containing protein.
    
 0.946
A0A317SYU8
RNAse P, Rpr2/Rpp21 subunit.
   
 0.911
A0A317SUS3
Vitamin B6 biosynthesis protein; Belongs to the PdxS/SNZ family.
     
  0.777
A0A317T1Y0
Uncharacterized protein.
    
   0.766
A0A317SDP9
Glycoside Hydrolase Family 128 protein.
     
  0.732
A0A317SYA4
DUF1763-domain-containing protein.
     
 0.725
A0A317SZX0
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
     
 0.725
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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