STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SQV4Velvet domain-containing protein. (695 aa)    
Predicted Functional Partners:
A0A317SQR7
Uncharacterized protein.
    
 0.860
A0A317SQM9
WD40 repeat-like protein.
   
 0.648
A0A317SP01
Velvet domain-containing protein.
  
 
 
0.634
A0A317SNY7
Ipi1_N domain-containing protein.
    
 0.629
A0A317SSX9
EF-hand protein; Belongs to the calmodulin family.
    
 0.624
A0A317SM84
EF-hand.
    
 0.619
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.617
A0A317SHN9
BZIP domain-containing protein.
    
 0.593
A0A317SQ01
S-adenosyl-L-methionine-dependent methyltransferase.
    
 
 0.593
A0A317SB70
Uncharacterized protein.
    
 
 0.591
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.