Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
A0A317SSL1ClpP/crotonase. (272 aa)    
Predicted Functional Partners:
A0A317SJP8
Acyl-CoA binding protein.
   
 0.995
A0A317SCR7
TPR-like protein.
    
 0.934
A0A317SIQ5
Methylcrotonoyl-CoA carboxylase subunit beta.
   
 0.921
A0A317SMC6
Uncharacterized protein.
 
 0.893
A0A317T0X5
ClpP/crotonase.
  
0.865
A0A317SLS8
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.860
A0A317SDI9
Acyl-CoA dehydrogenase NM domain-like protein.
   
 0.842
A0A317SPY8
NAD(P)-binding protein.
   
 0.835
A0A317T082
Acyl-CoA dehydrogenase NM domain-like protein.
   
 0.835
A0A317SC49
Sterol-binding-like protein.
   
 0.834
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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