STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SSL4Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
A0A317SQR7
Uncharacterized protein.
    
  0.692
A0A317SHF7
RhoGAP-domain-containing protein.
    
 0.507
A0A317SX55
POZ domain-containing protein; Belongs to the SKP1 family.
    
  0.480
A0A317SSR0
RING/U-box.
    
  0.467
A0A317SK15
PCI-domain-containing protein.
    
  0.466
A0A317SMZ3
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
  0.465
A0A317SKJ9
PCI domain-containing protein.
    
  0.463
A0A317SQ35
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
  0.461
A0A317T1J9
PCI domain-containing protein.
    
  0.461
A0A317SFL1
Cullin-domain-containing protein; Belongs to the cullin family.
    
  0.460
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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