STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SUK460S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (65 aa)    
Predicted Functional Partners:
A0A317SBN9
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.999
A0A317SDX1
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.999
A0A317SDX2
Ribosomal protein L6.
   
 0.999
A0A317SFG2
RRN7-type domain-containing protein.
   
 0.999
A0A317SFH6
Uncharacterized protein.
   
 0.999
A0A317SFL7
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 0.999
A0A317SG90
60S ribosomal protein L8.
   
 0.999
A0A317SGA5
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.999
A0A317SGU0
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 0.999
A0A317SH34
Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.999
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.