STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SW22Uncharacterized protein. (155 aa)    
Predicted Functional Partners:
A0A317SEA5
GOLD domain-containing protein.
    
 0.985
A0A317SX46
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.983
A0A317SPR9
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.959
A0A317SZM8
E3 ubiquitin-protein ligase.
    
 0.939
A0A317SPD1
Kinase-like protein.
    
 0.933
A0A317SG85
Ankyrin.
    
 0.918
A0A317SKX3
Ankyrin.
    
 0.918
A0A317SXD5
Uncharacterized protein.
    
 0.913
A0A317SUU9
Ubiquitin-domain-containing protein.
    
 0.910
A0A317T4K3
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.909
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.