STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SW46P-loop containing nucleoside triphosphate hydrolase protein. (1148 aa)    
Predicted Functional Partners:
A0A317SPC2
zf-RING-like domain-containing protein.
    
 0.999
A0A317SRT5
SP-RING-type domain-containing protein.
    
 0.999
A0A317SXP5
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
A0A317SXZ0
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.999
A0A317SB17
MAGE-domain-containing protein.
   
 0.997
A0A317SRD4
Ubiquitin-like protein.
    
 0.986
A0A317SJK3
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.984
A0A317SSF2
BRCT domain-containing protein.
   
 
 0.984
A0A317SVM0
DNA/RNA polymerase.
  
 0.963
A0A317SJW5
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
 0.943
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.