STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SX39Uncharacterized protein. (271 aa)    
Predicted Functional Partners:
A0A317SH41
Uncharacterized protein.
   
 
 0.949
A0A317T166
Cleft lip and palate transmembrane 1.
    
 
 0.945
A0A317SV50
Uncharacterized protein.
    
 
 0.772
A0A317T4L6
Mis6-domain-containing protein.
  
 
 
 0.679
A0A317SJJ9
Histone-fold-containing protein.
    
 
 0.624
A0A317SLT2
Histone-fold-containing protein.
    
 
 0.624
A0A317T1F3
Histone domain-containing protein.
    
 
 0.624
A0A317STA3
DNA-binding protein.
    
   0.612
A0A317SNE2
DDE-1 domain-containing protein.
    
 
 0.564
A0A317SVB8
DDE-domain-containing protein.
    
 
 0.564
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.