STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SZ71Lytic polysaccharide monooxygenase. (354 aa)    
Predicted Functional Partners:
A0A317SUU9
Ubiquitin-domain-containing protein.
   
  0.579
A0A317SC13
F-box domain-containing protein.
    
  0.566
A0A317SDW7
SANT domain-containing protein.
    
  0.566
A0A317SHW0
Uncharacterized protein.
    
  0.566
A0A317SLT3
Uncharacterized protein.
    
  0.566
A0A317SSV7
Uncharacterized protein.
    
  0.566
A0A317SYL5
mRNA triphosphatase CET1.
    
  0.566
A0A317SLF7
Uncharacterized protein.
    
 0.539
A0A317SYA9
HNHc domain-containing protein.
    
 0.539
A0A317SJU1
Ankyrin.
    
 0.504
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.