STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317SZR6Formyltransferase. (398 aa)    
Predicted Functional Partners:
A0A317SDM7
NAD(P)-binding protein.
  
 
 0.948
A0A317SQB9
FTHFS-domain-containing protein.
    
 0.946
A0A317SFA7
Phosphoribosylglycinamide formyltransferase.
    
 0.945
A0A317SCD4
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
    
 0.929
A0A317T018
FSH1-domain-containing protein.
    
 0.929
A0A317SIW5
Thymidylate synthase.
  
 
 0.927
A0A317SBQ5
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.919
A0A317SRZ3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.919
A0A317SSM1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.914
A0A317SRH9
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 
 0.910
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.