STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317T1A0P-loop containing nucleoside triphosphate hydrolase protein. (1076 aa)    
Predicted Functional Partners:
A0A317ST33
Adenine nucleotide alpha hydrolases-like protein.
   
 0.990
A0A317SPJ2
DnaJ-domain-containing protein.
  
 0.989
A0A317SBS0
Uncharacterized protein.
  
 
 0.971
A0A317SQP9
Ribosomal_L23eN domain-containing protein.
  
 0.944
A0A317SV88
Ribosomal protein S15, eukaryotic/archaeal; Belongs to the universal ribosomal protein uS19 family.
  
 0.944
A0A317T481
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.944
A0A317SFH6
Uncharacterized protein.
  
 0.943
A0A317SYC2
Uncharacterized protein.
  
 
 0.939
A0A317SRE3
60S ribosomal protein L7.
  
 0.938
A0A317T0V6
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.935
Your Current Organism:
Tuber magnatum
NCBI taxonomy Id: 42249
Other names: T. magnatum, gray truffle, white Piedmont truffle, white truffle
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