STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6Z9P0Uncharacterized protein. (141 aa)    
Predicted Functional Partners:
A0A2T6ZUD7
Rad4 transglutaminase-like domain-domain-containing protein.
    
 0.939
A0A2T7A428
Uncharacterized protein.
    
 0.939
A0A2T6ZYH1
SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-containing protein.
    
 
 0.927
A0A2T6ZWU4
Sfi1 spindle body protein-domain-containing protein.
    
 
 0.919
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
   
 
 0.912
A0A2T6ZJ10
XPC-binding domain-domain-containing protein.
   
 0.910
A0A2T7A367
WD40-repeat-containing domain protein.
    
 0.867
A0A2T6ZAM1
Uncharacterized protein.
    
 0.863
A0A2T6ZFU1
Dynein heavy chain, N-terminal region 1-domain-containing protein.
    
 0.863
A0A2T6ZUX5
Myosin N-terminal SH3-like domain-containing protein.
   
 0.851
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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