STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZAB7RRM domain-containing protein. (335 aa)    
Predicted Functional Partners:
A0A2T6ZTB5
Uncharacterized protein.
   
 0.954
A0A2T6ZQX1
RRM domain-containing protein.
  
 0.891
A0A2T7A460
RRM domain-containing protein.
  
 0.891
A0A2T7A9B7
RRM domain-containing protein.
    
 0.871
A0A2T6ZKS8
Nuclear cap-binding protein subunit 2.
   
 0.843
A0A2T6ZDU1
MIF4G like-domain-containing protein.
    
 0.819
A0A2T6ZBZ6
Uncharacterized protein.
   
 0.785
A0A2T6ZM57
Uncharacterized protein.
   
 0.785
A0A2T6ZF64
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.777
A0A2T7A2Y9
RNA polymerase.
   
  0.777
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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