STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZAN9Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (230 aa)    
Predicted Functional Partners:
A0A2T6ZHJ4
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.988
A0A2T6ZHH7
RING-type domain-containing protein.
    
 0.985
A0A2T6ZX93
Cullin; Belongs to the cullin family.
   
 0.975
A0A2T6ZN55
Cullin; Belongs to the cullin family.
   
 0.972
A0A2T7A5W6
Ubiquitin-related domain-containing protein.
    
 0.951
A0A2T6ZPK0
Cullin family-domain-containing protein; Belongs to the cullin family.
    
 0.926
A0A2T6ZL33
Ribosomal protein L32e.
 
      0.878
A0A2T7A2D5
Armadillo-type protein.
    
 0.873
A0A2T6ZA72
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
    
 0.866
A0A2T7A2S2
E2_bind domain-containing protein.
    
 0.863
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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