STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZAV8Uncharacterized protein. (217 aa)    
Predicted Functional Partners:
A0A2T6ZKF3
Fe-S_biosyn domain-containing protein.
   
 0.735
A0A2T7A360
HSCB_C domain-containing protein.
  
 
 0.684
A0A2T6ZWN7
Scaffold protein Nfu/NifU N terminal-domain-containing protein.
  
 
 0.607
A0A2T7A9A0
NifU-like N terminal domain-domain-containing protein; Belongs to the NifU family.
  
  
 0.600
A0A2T6ZVG1
Thioredoxin-like protein.
  
 0.574
A0A2T6ZWC3
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 0.574
LIA1
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.
    
 
 0.555
A0A2T7A0E3
Cysteine desulfurase IscS.
  
 
 0.513
A0A2T7A317
Pyridoxal phosphate-dependent transferase.
  
 
 0.513
A0A2T6ZIM7
GCV_T domain-containing protein.
  
 
 0.506
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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