STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZAZ1Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (698 aa)    
Predicted Functional Partners:
A0A2T7A3X8
Uncharacterized protein.
   
0.991
A0A2T6ZG83
UEV domain-domain-containing protein.
    
 0.989
A0A2T7A8T6
TRF2-interacting telomeric protein/Rap1 C terminal domain-domain-containing protein.
   
 0.978
A0A2T6ZTL8
Uncharacterized protein.
    
 0.970
A0A2T7A0V3
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.960
A0A2T6ZSK5
Ubiquitin-related domain-containing protein.
    
  0.938
A0A2T7A098
Ubiquitin-related domain-containing protein.
    
  0.938
Q9C1I8_TUBBO
Ubiquitin-related domain-containing protein.
    
  0.938
A0A2T6ZAW7
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.935
A0A2T6ZVA6
BZIP domain-containing protein.
    
  0.934
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.