STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZCB9Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
A0A2T6ZT29
Uncharacterized protein.
 
     0.935
A0A2T7A4T4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
     
 0.593
A0A2T6ZSS3
Translation protein SH3-like domain-containing protein.
 
      0.578
A0A2T6ZLN2
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.525
A0A2T6ZPS1
TAP42-like protein.
    
 0.518
A0A2T6ZMX1
Uncharacterized protein.
    
 0.517
A0A2T6ZS11
Telomere repeat binding factor-domain-containing protein.
    
 0.517
A0A2T6ZT80
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.517
A0A2T7A654
Uncharacterized protein.
    
 0.517
A0A2T6ZQK2
ATP synthase subunit gamma.
    
   0.511
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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