STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZCS8Uncharacterized protein. (119 aa)    
Predicted Functional Partners:
A0A2T7A0C2
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
   
 0.891
A0A2T6ZMA8
RRM domain-containing protein.
   
 0.882
A0A2T6ZDU1
MIF4G like-domain-containing protein.
   
 0.867
A0A2T6ZDU6
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.862
A0A2T7A5A3
Translation initiation factor eIF 4e-like domain-containing protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.862
A0A2T6ZKS8
Nuclear cap-binding protein subunit 2.
    
 0.849
A0A2T6ZPP2
Uncharacterized protein.
   
 0.845
A0A2T6ZPP4
Uncharacterized protein.
   
 0.845
A0A2T7A7B9
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.845
A0A2T7A5Q0
Translation initiation factor 2, alpha subunit.
   
 0.818
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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